From 1ff5f0c40d2c2b4248b2631fda497cd04001f438 Mon Sep 17 00:00:00 2001 From: Beech Rintoul <beech@FreeBSD.org> Date: Sun, 20 Jul 2008 21:19:13 +0000 Subject: - New port silo-4.6.1 A mesh and field I/O library and scientific database Silo is a library for reading and writing a wide variety of scientific data to binary, disk files. The files Silo produces and the data within them can be easily shared and exchanged between wholly independently developed applications running on disparate computing platforms. Consequently, Silo facilitates the development of general purpose tools for processing scientific data. One of the more popular tools that process Silo data files is the VisIt visualization tool. Silo supports gridless (point) meshes, structured meshes, unstructured-zoo and unstructured-arbitrary-polyhedral meshes, block structured AMR meshes, constructive solid geometry (CSG) meshes, piecewise-constant (e.g. zone-centered) and piecewise-linear (e.g. node-centered) variables defined on the node, edge, face or volume elements of meshes as well as the decomposition of meshes into arbitrary subset hierarchies including materials and mixing materials. In addition, Silo supports a wide variety of other useful objects to address various scientific computing application needs.Although the Silo library is a serial library, it has some key features which enable it to be applied quite effectively and scalably in parallel. PR: ports/125725 Submitted by: Pedro F. Giffuni <giffunip at tutopia.com> --- science/silo/Makefile | 78 ++++++++++++++++++++++++++++++ science/silo/distinfo | 3 ++ science/silo/files/patch-tests+Makefile.in | 11 +++++ science/silo/pkg-descr | 24 +++++++++ science/silo/pkg-plist | 16 ++++++ 5 files changed, 132 insertions(+) create mode 100644 science/silo/Makefile create mode 100644 science/silo/distinfo create mode 100644 science/silo/files/patch-tests+Makefile.in create mode 100644 science/silo/pkg-descr create mode 100644 science/silo/pkg-plist (limited to 'science/silo') diff --git a/science/silo/Makefile b/science/silo/Makefile new file mode 100644 index 000000000000..4e92518570d8 --- /dev/null +++ b/science/silo/Makefile @@ -0,0 +1,78 @@ +# New ports collection makefile for: silo +# Date created: 17 jul 2008 +# Whom: Pedro F. Giffuni <giffunip@tutopia.com> +# +# $FreeBSD$ +# + +PORTNAME= silo +PORTVERSION= 4.6.1 +CATEGORIES= science +MASTER_SITES= https://wci.llnl.gov/codes/${PORTNAME}/silo-${PORTVERSION}/ + +MAINTAINER= giffunip@tutopia.com +COMMENT= A mesh and field I/O library and scientific database + +LIB_DEPENDS= netcdf.4:${PORTSDIR}/science/netcdf + +USE_AUTOTOOLS= libtool:15 +GNU_CONFIGURE= yes +CONFIGURE_ENV= CPPFLAGS="${CFLAGS} ${PTHREAD_CFLAGS} -I${LOCALBASE}/include" \ + LDFLAGS="${LDFLAGS} ${PTHREAD_LIBS} -L${LOCALBASE}/lib" + +USE_GMAKE= yes +CONFIGURE_ARGS= --enable-shared +USE_LDCONFIG= yes + +USE_XLIB= yes +USE_QT_VER= 3 +QT_COMPONENTS= moc uic + +OPTIONS= PYTHON "Enable Python Module" On \ + HDF5 "Enable HDF5 Driver" Off \ + BROWSER "Enable Silex Browser" Off \ + FORTRAN "Compile Fortran interface" Off \ + OPTIMIZATION "Enable extra optimizations" On + +.include <bsd.port.pre.mk> + +.ifdef WITH_PYTHON +USE_PYTHON= yes +CONFIGURE_ARGS+= --enable-pythonmodule +PLIST_SUB+= WITH_PYTHON="" +.else +PLIST_SUB+= WITH_PYTHON="@comment " +.endif + +.ifdef WITH_HDF5 +LIB_DEPENDS+= hdf5.0:${PORTSDIR}/science/hdf5 +CONFIGURE_ARGS= --with-hdf5=${LOCALBASE} +PLIST_SUB+= WITH_HDF5="" +PLIST_SUB+= WITH_HDF5="@comment " +.else +PLIST_SUB+= WITH_HDF5="@comment " +PLIST_SUB+= WITH_NCDF="" +.endif + +.ifdef WITH_BROWSER +CONFIGURE_ARGS+= --enable-silex +PLIST_SUB+= WITH_BROWSER="" +.else +PLIST_SUB+= WITH_BROWSER="@comment " +.endif + +.ifdef WITH_FORTRAN +USE_FORTRAN= yes +CONFIGURE_ARGS+= --enable-fortran +.else +CONFIGURE_ARGS+= --disable-fortran +.endif + +.ifdef WITH_OPTIMIZATION +CONFIGURE_ARGS+= --enable-optimization +.endif + +regression-test: build + @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} ${GMAKE} check + +.include <bsd.port.post.mk> diff --git a/science/silo/distinfo b/science/silo/distinfo new file mode 100644 index 000000000000..bdd51fae619a --- /dev/null +++ b/science/silo/distinfo @@ -0,0 +1,3 @@ +MD5 (silo-4.6.1.tar.gz) = 34b030e8c098b89bd79ee1b23477b283 +SHA256 (silo-4.6.1.tar.gz) = 8e5c314db468613a2a6ddf7c3ce07a0a9f969e854e5957011f0cade184bf0ac7 +SIZE (silo-4.6.1.tar.gz) = 2618748 diff --git a/science/silo/files/patch-tests+Makefile.in b/science/silo/files/patch-tests+Makefile.in new file mode 100644 index 000000000000..2107a7d28f34 --- /dev/null +++ b/science/silo/files/patch-tests+Makefile.in @@ -0,0 +1,11 @@ +--- tests/Makefile.in.orig 2008-03-27 13:56:49.000000000 -0500 ++++ tests/Makefile.in 2008-03-27 13:57:36.000000000 -0500 +@@ -407,7 +407,7 @@ + INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@ + LDFLAGS = @LDFLAGS@ + LIBOBJS = @LIBOBJS@ +-LIBS = @LIBS@ ++LIBS = @LIBS@ -lcompat + LIBTOOL = @LIBTOOL@ + LN_S = @LN_S@ + LOCAL = @LOCAL@ diff --git a/science/silo/pkg-descr b/science/silo/pkg-descr new file mode 100644 index 000000000000..d63472f11c2b --- /dev/null +++ b/science/silo/pkg-descr @@ -0,0 +1,24 @@ +A mesh and field I/O library and scientific database + +Silo is a library for reading and writing a wide variety of scientific +data to binary, disk files. The files Silo produces and the data within +them can be easily shared and exchanged between wholly independently +developed applications running on disparate computing platforms. + +Consequently, Silo facilitates the development of general purpose tools +for processing scientific data. One of the more popular tools that process +Silo data files is the VisIt visualization tool. + +Silo supports gridless (point) meshes, structured meshes, unstructured-zoo +and unstructured-arbitrary-polyhedral meshes, block structured AMR meshes, +constructive solid geometry (CSG) meshes, piecewise-constant (e.g. +zone-centered) and piecewise-linear (e.g. node-centered) variables defined +on the node, edge, face or volume elements of meshes as well as the +decomposition of meshes into arbitrary subset hierarchies including +materials and mixing materials. In addition, Silo supports a wide variety +of other useful objects to address various scientific computing +application needs.Although the Silo library is a serial library, it has +some key features which enable it to be applied quite effectively and +scalably in parallel. + +WWW: https://wci.llnl.gov/codes/silo/ diff --git a/science/silo/pkg-plist b/science/silo/pkg-plist new file mode 100644 index 000000000000..48a489b9e50f --- /dev/null +++ b/science/silo/pkg-plist @@ -0,0 +1,16 @@ +%%WITH_BROWSER%%bin/browser +bin/silodiff +bin/silex +bin/silock +include/silo.h +include/silo.inc +include/pmpio.h +%%WITH_PYTHON%%lib/Silo.a +%%WITH_PYTHON%%lib/Silo.la +%%WITH_PYTHON%%lib/Silo.so +%%WITH_NCDF%%lib/libsilo.a +%%WITH_NCDF%%lib/libsilo.la +%%WITH_NCDF%%lib/libsilo.so +%%WITH_HDF5%%lib/libsiloh5.a +%%WITH_HDF5%%lib/libsiloh5.la +%%WITH_HDF5%%lib/libsiloh5.so -- cgit v1.2.3