| Commit message (Collapse) | Author | Age | Files | Lines |
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Tiny panel listing opened windows for gnome-compliant WM
PR: 34006
Submitted by: The Anarcat <anarcat@anarcat.dyndns.org>
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PR: 33924, 34812
Submitted by: maintainer
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allowing to analyse several proteins at the same time. The proteins can be
superimposed in order to deduce structural alignments and compare their
active sites or any other relevant parts. Amino acid mutations, H-bonds,
angles and distances between atoms are easy to obtain thanks to the
intuitive graphic and menu interface.
Moreover, Swiss-PdbViewer is tightly linked to Swiss-Model, an automated
homology modelling server developped at Glaxo Welcome Experimental Research
in Geneva. Working with these two programs greatly reduces the amount of work
necessary to generate models, as it is possible to thread a protein primary
sequence onto a 3D template and get an immediate feedback of how well the
threaded protein will be accepted by the reference structure before
submitting a request to build missing loops and refine sidechain packing.
Swiss-PdbViewer can also read electron density maps, and provides various
tools to build into the density. In addition, various modelling tools are
integrated and command files for popular energy minimisation packages can be
generated.
Finally, as a special bonus, POV-Ray scenes can be generated from the
current view in order to make stunning ray-traced quality images.
WWW: http://www.expasy.ch/spdbv/
PR: 33902
Submitted by: chuynh@biolateral.com.au
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(aka associative arrays). Data is stored as void *'s so any data structure
can be stored.
PR: 33859
Submitted by: andrew@ugh.net.au
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PR: 33795
Submitted by: Lyndon Nerenberg <lyndon@atg.aciworldwide.com>
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GIMP Print Printer Driver
PR: 33482
Submitted by: David Gilbert <dgilbert@canoe.velocet.net>
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XmHTML does not build: debug.c:113: initializer element is not constant
When trying to build XmHTML-1.1.7_1 on -current as of 7-JAN-2002, I got
the following error during build:
rm -f .libs/debug.lo
cc -O -pipe -DVERSION=1107 -DHAVE_REGEX_H -DHAVE_LIBJPEG -DHAVE_LIBPNG -DMotif -I. -I../include -I../include/common -I../../include -I../../include/common -I../../include/XmHTML -I/usr/X11R6/include -I/usr/local/include -c debug.c -fPIC -DPIC -o .libs/debug.lo
debug.c:113: initializer element is not constant
gmake[2]: *** [debug.o] Fehler 1
Strangely enough, the build continued without rebuilding the remaining
files of this directory. The make install aborted, of course, because
parts of the product had not been built.
(gmake problem)
PR: 34636
Submitted by: gwk@mscsoftware.com
Approved by: Lars.Koeller@Uni-Bielefeld.DE
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Noticed by: ume
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synchronization.
PR: 36227
Submitted by: Andrew Shevtsov <nyxo@dnuc.polyn.kiae.su>
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Submitted by: gslin@ccca.nctu.edu.tw, Sergii Laskavyi <ls@gambit.com.ru>
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Do not compile with 'make -k'.
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PR: 36616
Submitted by: hannes sowa <satbran@web.de>
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The maintainer wasn't reachable by myself and by the submitter, so no
review/approval from him.
Approved by: steve
Submitted by: marius@alchemy.franken.de
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PR: 36649
Submitted by: Oliver Braun <obraun@informatik.unibw-muenchen.de>
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Submitted by: "Jason R. Mastaler" <jason-dated-1018216403.d8ed28@mastaler.com>
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Submitted by: sumikawa
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When the databases/postgresql7 port was updated from postgresql-7.1.x to
postgresql-7.2, libpq-fe.h moved from PREFIX/include/pgsql to
PREFIX/include for reasons I can't figure out.
This applies a band-aid until I can get clarification from the postgresql
port maintainer <girgen@partitur.se>, but I think the port might be
"broken" in its placement of some header files.
Reported by: kris
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PR: 36645
Submitted by: maintainer
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"cluster-software" module patches).
Make port LOCALBASE independent (ports/35945).
PR: 35945 (modified)
Submitted by: Kazutoshi Kubota <tu7k-kbt@asahi-net.or.jp>
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JDK 1.2 while the FreeBSD JDK 1.3 was not installed,
but the FreeBSD JDK 1.2 was.
Reported by: lioux
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Submitted by: lioux
PR: ports/36078 (part of)
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{WITH,WITHOUT}_X11 and detect ${X11BASE}/lib/libX11.a.
Reported by: bento
Obtained from: security/ssh (partly)
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a module that was included in 2.5. While I'm here, update to 2.5.1.
Reported by: bento
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definition has been changed somehow. Add a patch to override it with
the previous definition.
Addressed by: Marc Espie <espie@openbsd.org>
- Add a patch to fix bzero()/bcopy() namespace collision. (by me)
- Change one of the master sites.
Submitted by: Kimura Fuyuki <fuyuki@mj.0038.net>
Discussed on: ports-jp@jp.FreeBSD.org
On behalf of: max (MAINTAINER)
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PR: 36637
Submitted by: maintainer
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PR: 36615
Submitted by: maintaienr
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PR: 32864
Submitted by: KATO Tsuguru <tkato@prontomail.com>
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PR: 36633
Submitted by: Jason Harris <jharris@widomaker.com>
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PR: 36632
Submitted by: Jason Harris <jharris@widomaker.com>
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PR: 36631
Submitted by: Jason Harris <jharris@widomaker.com>
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PR: 36636
Submitted by: maintainer
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/sys no longer needs to be accessible, nor does Glide support (unlike with
4.1.0). Bump PORTREVISION to denote update.
PR: 36181
Submitted by: Eric Anholt <eanholt@gladstone.uoregon.edu>
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Use \015 in Makefile instead of literal CR character.
PR: ports/36027
Submitted by: parv <parv_@yahoo.com>
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o Fix a bug of "stop" feature in smokeping.sh.
Submitted by: Lars Thegler <lars@thegler.dk> (maintainer)
PR: ports/36006
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PR: 35839, 36588
Submitted by: KANOU Hiroki <kanou@mil.allnet.ne.jp>,
Miguel Mendez <flynn@energyhq.homeip.net>
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on -lintl instead of build-depending on msgfmt and make sure -lintl is
linked into the shared -lpq.
Approved by: maintainer
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branch has moved to www/jakarta-tomcat3.
PR: 31096, 32022
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in the base system is more up-to-date and is being actively maintained.
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