diff options
| author | James E. Housley <jeh@FreeBSD.org> | 2000-10-12 12:31:13 +0000 |
|---|---|---|
| committer | James E. Housley <jeh@FreeBSD.org> | 2000-10-12 12:31:13 +0000 |
| commit | 1bc69d7e0ce9117fb4a800b3ffbcb6de72ee189a (patch) | |
| tree | b38dfd2fa2832861c5a9d024d34eeaddc4509e55 /biology/fastdnaml/pkg-descr | |
| parent | Initial import of palmpower 1.0.1 (diff) | |
Initial import of fastDNAml Version 1.2.2
The faster variant of DNAML, makes phylogenetic trees using maximum likelihood
PR: 21931
Submitted by: Motomichi Matsuzaki <mzaki@e-mail.ne.jp>
Diffstat (limited to 'biology/fastdnaml/pkg-descr')
| -rw-r--r-- | biology/fastdnaml/pkg-descr | 22 |
1 files changed, 22 insertions, 0 deletions
diff --git a/biology/fastdnaml/pkg-descr b/biology/fastdnaml/pkg-descr new file mode 100644 index 000000000000..391df7e37c84 --- /dev/null +++ b/biology/fastdnaml/pkg-descr @@ -0,0 +1,22 @@ +fastDNAml is a program for estimating maximum likelihood phylogenetic trees +from nucleotide sequences. + +WWW: http://geta.life.uiuc.edu/~gary/programs/fastDNAml.html + +fastDNAml is an attempt to solve the same problem as Joseph Felsenstein's +DNAML, but to do so faster and using less memory, so that larger trees and/or +more bootstrap replicates become tractable. Much of fastDNAml is merely a +recoding of the PHYLIP 3.3 DNAML program from PASCAL to C. + +For Felsenstein's phylogenetic analysis softwares, including the latest +versions of DNAML, visit the PHYLIP Home Page: + http://evolution.genetics.washington.edu/phylip.html + +When publishing work that based on results from fastDNAml please cite: + + Felsenstein, J. 1981. Evolutionary trees from DNA sequences: + A maximum likelihood approach. J. Mol. Evol. 17: 368-376. + + Olsen, G. J., Matsuda, H., Hagstrom, R., and Overbeek, R. 1994. + fastDNAml: A tool for construction of phylogenetic trees of DNA + sequences using maximum likelihood. Comput. Appl. Biosci. 10: 41-48. |